Protein ZmOrphan338
ZmOrphan338 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan338
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B4G0F7
Subgenome: 1

Protein ZmOrphan338

ZmOrphan338 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481PF13672
Zm00001eb063490_T002
Zm00001eb063490_T001
Zm00001eb063490_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d034738DAPseq no logo sequence fimo position
Zm00001d034738DAPseq no logo sequence fimo position
Zm00001d034738ChIPseq no logo sequence fimo position
Zm00001d034738PChIPseq no logo sequence fimo position

Interactions where ZmOrphan338 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan338 is the target  
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There are 120 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb063490_T002 from maize genome v5

Amino Acid Sequence
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MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF13672
PF00481
Hover here to show all domains

Nucleotide Sequence
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TATCCGCCCGTTTTCACCCCTAACG...

GRMZM2G156543_T01 from maize genome v3


Related TFome: pUT6713

Amino Acid Sequence
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MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

Nucleotide Sequence
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ATTTTGTTTTTTATTAAAAAAGGGT...

Zm00001d034738_T001 from maize genome v4

Amino Acid Sequence
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MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRHFHDDITVIVLFINYDLLLKGAPQGQPLSIRCALDY

Nucleotide Sequence
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CGGCGTCGCACCGAACCCGACACGG...

Zm00001eb063490_T001 from maize genome v5

Amino Acid Sequence
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MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVGV

Nucleotide Sequence
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TATCCGCCCGTTTTCACCCCTAACG...

Zm00001eb063490_T003 from maize genome v5

Amino Acid Sequence
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MLGPLLRLLSACGGVWPTSPAPGAAASSSASSGDDSEGRDGLLWWRDLARCHAGDVSVAVAQANQVLEDQCRLDSAPSIG
TVVGVFDGHGGPDAARFACDHLVPNLREASSGPRGVTADAIREAFLATEEGFLALVSSLWEAQPDIATAGTCCLVGVVHN
RTLFVANLGDSRAVLGKKAGRAGQIAAEQLSSEHNANQEAVRQELMAQHPDDAQIVALKHGVWRVRGLIQVSRSIGDVYL
KHAKYNTDQIKPKFRLPESFSKPLLSADPSIISRDLEPNDCFIIFASDGLWEHLSNQEAVEIVHSHQRAGSARRLIKAAL
QEAARKREMRYSDLTKIDKKVRRDNPSPSDVP

Nucleotide Sequence
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TATCCGCCCGTTTTCACCCCTAACG...


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